Satellite remote sensing can be used to investigate spatially distributed hydrological states for use in modeling, assessment, and management. However, in the visual wavelengths, cloud cover can often obscure significant portions of the images. This study develops a rule-based, multistep method for removing clouds from MODIS snow cover area (SCA) images. The methods used include combining images from more than one satellite, time interpolation, spatial interpolation, and estimation of the probability of snow occurrence based on topographic information. Applied over the upper Salt River basin in Arizona, the method reduced the degree of cloud obscuration by 93.8%, while maintaining a similar degree of image accuracy to that of the original images.